flowio
No security findings. Scanned 1 time, most recently 2026-10-21.
Second scanner: NVIDIA SkillSpector
Independent static run, no language model, over the same files as the Cisco scan above. How the two scanners compare across the whole corpus: Two scanners, one corpus.
What this skill does
Reads, inspects, and writes Flow Cytometry Standard (FCS) 2.0, 3.0, and 3.1 files with FlowIO. Use for low-level FCS metadata and channel inspection, NumPy event extraction, multi-dataset files, table export, and FCS 3.1 creation; use FlowKit for compensation, cytometry transforms, gating, or FlowJo workspaces.
- Package
- 7 files, 79 KB
- SKILL.md
- 1593 words, 12+ sections
- Code
- Python (1)
- Allowed tools
ReadWriteBash- License
- BSD-3-Clause license
- Compatibility
- Requires Python 3.9-3.13, uv, and FlowIO 1.4.0. NumPy is installed with FlowIO; pandas is optional for DataFrame workflows. Runtime parsing is local and needs no credentials or network access.
SKILL.md covers: FlowIO · Purpose · Install · Operating Workflow · Critical Semantics · TEXT keys are normalized · Events have two representations · Channel numbering uses two conventions · Writing is intentionally limited · Quick Start: Read an FCS File · Quick Start: Read Multiple Datasets · Quick Start: Create an FCS 3.1 File
Findings
No findings. SAFE
What is in the package
| File | Kind | Size |
|---|---|---|
SKILL.md | doc | 13 KB |
references/api_reference.md | doc | 12 KB |
references/fcs_semantics.md | doc | 10 KB |
references/sources.md | doc | 5.7 KB |
references/troubleshooting.md | doc | 12 KB |
references/workflows.md | doc | 12 KB |
scripts/inspect_fcs.py | script | 15 KB |
External hosts referenced
github.com flowio.readthedocs.io doi.org arxiv.org pubmed.ncbi.nlm.nih.gov export.arxiv.org flowkit.readthedocs.io numpy.org pandas.pydata.org pmc.ncbi.nlm.nih.gov pypi.org
Hostnames that appear in the skill's files. Referencing a host is not a finding; compare against the findings above and the skill's stated purpose.
Environment variables referenced
FLOWIO_SKILL_DIR
Package contents recorded 2026-10-22 at commit 593377bb0487. The scan above ran against the version current at scan time; the two can differ if the skill has since been updated.
What we checked
- Static analyzer. Pattern rules over SKILL.md and bundled files: known-bad commands, exfiltration URLs, secrets, obfuscation.
- Bytecode analyzer.
- Pipeline analyzer.
- Correlation analyzer.
- Behavioral analyzer. Checks what the skill asks the agent to do against what its description claims it does.
- Trigger analyzer. Looks for instructions that fire on conditions the user did not ask for.
What we did not check
- Runtime behaviour. The skill was not executed; findings come from reading its files.
- Anything fetched at install or run time, including remote scripts, package dependencies, and URLs the skill tells the agent to open.
- Content the analyzers cannot read: images, binaries, and some non-English text.
- Known scanner bypass classes. See the methodology and limitations page.
Sources
- Repository: https://github.com/K-Dense-AI/scientific-agent-skills
- Raw scan result: skills-flowio-scan.json
- Badge for your README:
- Request a re-scan