tiledbvcf

SAFE max severity SAFESkillSpector Caution 22 registry K-Dense-AI last scanned 1 scan

No security findings. Scanned 1 time, most recently 2026-10-21.

Second scanner: NVIDIA SkillSpector

Independent static run, no language model, over the same files as the Cisco scan above. How the two scanners compare across the whole corpus: Two scanners, one corpus.

What this skill does

Stores and retrieves genomic variant calls with TileDB-VCF. Use for indexed single-sample VCF/BCF ingestion, incremental cohorts, region and sample queries, streaming results, allele statistics, QC, and VCF/BCF export locally or through TileDB Cloud.

Package
2 files, 20 KB
SKILL.md
1527 words, 12+ sections
Code
None. Instructions only.
License
MIT license
Compatibility
Requires a native TileDB-VCF installation and Python 3.9-3.12 for the reviewed Conda builds. bcftools compresses/indexes input fixtures. Installation and remote storage need network access; TileDB Cloud needs its Python client, account token, and storage permissions.

SKILL.md covers: TileDB-VCF · When to use · Install and verify the native stack · Prepare and create a cohort · Incremental ingestion uses the existing dataset; do not call create_dataset again. · Query completely and interpret coordinates correctly · Export and validate · Cohort statistics and QC · Object storage and TileDB Cloud · Illustrative: requires an accessible registered cohort and a billing namespace. · Illustrative, mutating cloud job: use only for an authorized ingestion task. · Official references

Findings

No findings. SAFE

What is in the package

FileKindSize
SKILL.mddoc14 KB
references/verification.mddoc6.0 KB

External hosts referenced

github.com tiledb-inc.github.io pypi.org api.anaconda.org api.tiledb.com samtools.github.io

Hostnames that appear in the skill's files. Referencing a host is not a finding; compare against the findings above and the skill's stated purpose.

Environment variables referenced

TILEDB_REST_TOKEN TILEDB_REST_HOST

Package contents recorded 2026-10-22 at commit 593377bb0487. The scan above ran against the version current at scan time; the two can differ if the skill has since been updated.

What we checked

What we did not check

Sources